- GENE - Static variable in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.MaterialTypeIdentifier
-
Material identifier for a gene.
- generateCode(String, String, String) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Generate Code.
- getAttachmentHolderId() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Attachment.AttachmentInitializer
-
- getAttachmentHolderId() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Attachment
-
Returns the id of the entity holding this attachment.
- getAttribute() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchCriteria.AttributeMatchClause
-
Return the code of the attribute to compare against.
- getAttribute() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchCriteria.TimeAttributeMatchClause
-
Return the code of the attribute to compare against.
- getAugmentedCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.MaterialIdentifier
-
- getBiologicalExperiment() - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.MsInjectionDataInfo
-
- getBiologicalExperimentIdentifier() - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.MsInjectionDataInfo
-
- getBiologicalSampleID() - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.MsInjectionDataInfo
-
- getBiologicalSampleIdentifier() - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.MsInjectionDataInfo
-
- getBiologicalSampleProperties() - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.MsInjectionDataInfo
-
- getChildren() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample
-
Return the children.
- getChildren() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample.SampleInitializer
-
- getChildren() - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.DataSet
-
- getChildrenCodes() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- getChildrenCodes() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet
-
Return the children codes.
- getChildrenJson() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample
-
- getClassName() - Method in class ch.systemsx.cisd.common.exceptions.NotImplementedException.StackTraceExtractor
-
- getCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- getCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet
-
Returns the data set code;
- getCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataStore
-
- getCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityType
-
Returns the unique entity type code.
- getCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityTypeInitializer
-
- getCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Experiment.ExperimentInitializer
-
- getCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Experiment
-
Returns the experiment code.
- getCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.id.dataset.DataSetCodeId
-
- getCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.id.material.MaterialCodeAndTypeCodeId
-
- getCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.NewVocabularyTerm
-
Return the term's code.
- getCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Project
-
Returns the project code.
- getCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyType
-
Return the code of this property type.
- getCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyType.PropertyTypeInitializer
-
- getCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Role
-
Returns role code.
- getCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample
-
Returns the sample code.
- getCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample.SampleInitializer
-
- getCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SpaceWithProjectsAndRoleAssignments
-
Returns the space code.
- getCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Vocabulary
-
Returns the vocabulary code.
- getCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.VocabularyTerm
-
- getCode() - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.DataSet
-
- getCode() - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.Experiment
-
- getCodePrefix() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SampleType
-
Returns code prefix used to create sample code automatically.
- getCodePrefix() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SampleType.SampleTypeInitializer
-
- getCompareMode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchCriteria.MatchClause
-
- getContainedDataSets() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- getContainedDataSets() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet
-
- getContainerOrNull() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- getContainerOrNull() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet
-
- getCriteria() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchSubCriteria
-
- getDataSetCodes() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataStoreURLForDataSets
-
A set of data sets that can be found in this data store.
- getDataSetKind() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSetType.DataSetTypeInitializer
-
- getDataSetKind() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSetType
-
Returns the kind of data sets of this type.
- getDataSetMetaData(String, List<String>) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Returns meta data for all specified data sets.
- getDataSetMetaData(String, List<String>, EnumSet<DataSetFetchOption>) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Returns meta data for all specified data sets.
- getDataSets() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.MetaprojectAssignments
-
- getDataSets() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.MetaprojectAssignmentsIds
-
- getDataSets() - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.MsInjectionDataInfo
-
- getDataSetTypeCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- getDataSetTypeCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet
-
- getDatasetTypeCodes() - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.DataStoreServerProcessingPluginInfo
-
Returns a list data set type codes for all data sets for which the plugin is available.
- getDataStoreBaseURLs(String, List<String>) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Returns the download URL for the data store of specified data sets.
- getDataStoreURL() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataStoreURLForDataSets
-
The base URL of the data store.
- getDataType() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyType
-
- getDataType() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyType.PropertyTypeInitializer
-
- getDefaultPutDataStoreBaseURL(String) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Returns the URL for the default data store server for this openBIS AS.
- getDescription() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Attachment.AttachmentInitializer
-
- getDescription() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Attachment
-
Returns the description given by the user when uploading this attachment.
- getDescription() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityType
-
Returns the description or null
if undefined.
- getDescription() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityTypeInitializer
-
- getDescription() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.NewVocabularyTerm
-
Return the term's description.
- getDescription() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Project
-
Returns the project description.
- getDescription() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyType
-
Return the extended description.
- getDescription() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyType.PropertyTypeInitializer
-
- getDescription() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.ValidationPluginInfo
-
- getDescription() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Vocabulary
-
Returns the vocabulary description.
- getDesiredValue() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchCriteria.MatchClause
-
- getDownloadLink() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Attachment.AttachmentInitializer
-
- getDownloadLink() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Attachment
-
Returns the download link.
- getDownloadUrl() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataStore
-
- getEmail() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityRegistrationDetails.EntityRegistrationDetailsInitializer
-
- getEndOfChain(Throwable) - Static method in class ch.systemsx.cisd.common.exceptions.ExceptionUtils
-
Returns the last Throwable
of a chain of throwables.
- getExperimentIdentifier() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- getExperimentIdentifier() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet
-
Returns the identifier of the Experiment to which this data set belongs.
- getExperimentIdentifierOrNull() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample
-
- getExperimentIdentifierOrNull() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample.SampleInitializer
-
- getExperiments() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.MetaprojectAssignments
-
- getExperiments() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.MetaprojectAssignmentsIds
-
- getExperimentTypeCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Experiment.ExperimentInitializer
-
- getExperimentTypeCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Experiment
-
Returns the experiment type code.
- getExternalDataManagementSystem() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- getExternalDataManagementSystem() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet
-
- getExternalDataSetCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- getExternalDataSetCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet
-
- getExternalDataSetLink() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- getExternalDataSetLink() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet
-
- getFetchOptions() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet
-
- getFieldType() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchCriteria.MatchClause
-
The field type this MatchClause matches against.
- getFileName() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Attachment.AttachmentInitializer
-
- getFileName() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Attachment
-
Returns the file name of this attachment.
- getFirstName() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityRegistrationDetails.EntityRegistrationDetailsInitializer
-
- getFlag() - Method in class ch.systemsx.cisd.common.exceptions.Status
-
- getHostUrl() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataStore
-
- getId() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- getId() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet
-
Returns tech id of the data set.
- getId() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Experiment.ExperimentInitializer
-
- getId() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Experiment
-
Returns the experiment id.
- getId() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Material
-
- getId() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Material.MaterialInitializer
-
- getId() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Project
-
Returns the techical database id of the project.
- getId() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample
-
Returns the sample id.
- getId() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample.SampleInitializer
-
- getId() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Vocabulary
-
Returns the vocabulary id.
- getId() - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.DataSet
-
- getId() - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.Experiment
-
- getId() - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.PropertyKey
-
Returns the ID.
- getIdentifier() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Experiment.ExperimentInitializer
-
- getIdentifier() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Experiment
-
Returns the experiment identifier.
- getIdentifier() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.id.ObjectIdentifierId
-
- getIdentifier() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Project
-
- getIdentifier() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample
-
Returns the sample identifier;
- getIdentifier() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample.SampleInitializer
-
- getInstance() - Static method in class ch.systemsx.cisd.common.api.retry.config.DefaultRetryConfiguration
-
- getInterfaceName() - Method in class ch.systemsx.cisd.common.api.RpcServiceInterfaceDTO
-
The name of this interface used for identification.
- getInterfaceName() - Method in class ch.systemsx.cisd.common.api.RpcServiceInterfaceVersionDTO
-
The name of this interface used for identification.
- getKey() - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.DataStoreServerProcessingPluginInfo
-
Returns a unique key of the plugin.
- getLabel() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.NewVocabularyTerm
-
Return the term's label.
- getLabel() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyType
-
Return the label shown in forms.
- getLabel() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyType.PropertyTypeInitializer
-
- getLabel() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.VocabularyTerm
-
- getLabel() - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.DataStoreServerProcessingPluginInfo
-
Returns a human readable name of the plugin.
- getLabel() - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.PropertyKey
-
Returns the label.
- getLastName() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityRegistrationDetails.EntityRegistrationDetailsInitializer
-
- getLatestDataSetRegistrationDates() - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.MsInjectionDataInfo
-
- getMainDataSetPath() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSetType.DataSetTypeInitializer
-
- getMainDataSetPath() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSetType
-
Returns main data set path if defined.
- getMainDataSetPattern() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSetType.DataSetTypeInitializer
-
- getMainDataSetPattern() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSetType
-
Returns main data set pattern if defined.
- getMajorVersion() - Method in interface ch.systemsx.cisd.common.api.IRpcService
-
Returns the major version of the server side interface.
- getMajorVersion() - Method in class ch.systemsx.cisd.common.api.RpcServiceInterfaceVersionDTO
-
The major version of the interface.
- getMatchClauses() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchCriteria
-
Get a list of MatchClause objects this SearchCriteria will match against.
- getMaterialByCodes(String, List<MaterialIdentifier>) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Returns the materials with specified identifiers (i.e.
- getMaterialCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Material.MaterialInitializer
-
- getMaterialCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.MaterialIdentifier
-
- getMaterialProperties() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Material
-
- getMaterialProperties() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Material.MaterialInitializer
-
- getMaterials() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.MetaprojectAssignments
-
- getMaterials() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.MetaprojectAssignmentsIds
-
- getMaterialTypeCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.MaterialTypeIdentifier
-
Returns the code of this material type.
- getMaterialTypeIdentifier() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Material.MaterialInitializer
-
- getMaterialTypeIdentifier() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.MaterialIdentifier
-
- getMaximumNumberOfRetries() - Method in interface ch.systemsx.cisd.common.api.retry.config.RetryConfiguration
-
- getMaximumNumberOfRetries() - Method in class ch.systemsx.cisd.common.api.retry.config.StaticRetryConfiguration
-
- getMessage() - Method in exception ch.systemsx.cisd.common.exceptions.NotImplementedException
-
Returns the error message for this exception.
- getMetaproject() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.MetaprojectAssignments
-
- getMetaproject(String, IMetaprojectId) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Returns all entities tagged with given metaproject.
- getMetaprojectOnBehalfOfUser(String, IMetaprojectId, String) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Returns all entities tagged with given metaproject for specified user.
- getMetaprojects() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- getMetaprojects() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet
-
- getMetaprojects() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Experiment.ExperimentInitializer
-
- getMetaprojects() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Experiment
-
- getMetaprojects() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Material
-
- getMetaprojects() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Material.MaterialInitializer
-
- getMetaprojects() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample
-
- getMetaprojects() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample.SampleInitializer
-
- getMetaprojectsJson() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample
-
- getMethodName() - Method in class ch.systemsx.cisd.common.exceptions.NotImplementedException.StackTraceExtractor
-
- getMinorVersion() - Method in interface ch.systemsx.cisd.common.api.IRpcService
-
Returns the minor version of this server side interface.
- getMinorVersion() - Method in class ch.systemsx.cisd.common.api.RpcServiceInterfaceVersionDTO
-
The major version of the interface.
- getModificationDate() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityRegistrationDetails.EntityRegistrationDetailsInitializer
-
- getModificationDate() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityRegistrationDetails
-
- getModifierEmail() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityRegistrationDetails.EntityRegistrationDetailsInitializer
-
- getModifierEmail() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityRegistrationDetails
-
- getModifierFirstName() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityRegistrationDetails.EntityRegistrationDetailsInitializer
-
- getModifierFirstName() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityRegistrationDetails
-
- getModifierLastName() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityRegistrationDetails.EntityRegistrationDetailsInitializer
-
- getModifierLastName() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityRegistrationDetails
-
- getModifierUserId() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityRegistrationDetails.EntityRegistrationDetailsInitializer
-
- getModifierUserId() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityRegistrationDetails
-
- getMsInjectionSampleCode() - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.MsInjectionDataInfo
-
- getMsInjectionSampleID() - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.MsInjectionDataInfo
-
- getMsInjectionSampleProperties() - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.MsInjectionDataInfo
-
- getMsInjectionSampleRegistrationDate() - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.MsInjectionDataInfo
-
- getName() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyTypeGroup
-
Returns the name of this group (section).
- getName() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyTypeGroup.PropertyTypeGroupInitializer
-
- getName() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.ValidationPluginInfo
-
- getOperator() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchCriteria
-
Gets the operator for combining MatchClause objects.
- getOrdinal() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.VocabularyTerm
-
- getParentCodes() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- getParentCodes() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet
-
Return the parent codes.
- getParents() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample
-
Return the parents.
- getParents() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample.SampleInitializer
-
- getParents() - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.DataSet
-
- getParentsJson() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample
-
- getPermId() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Experiment.ExperimentInitializer
-
- getPermId() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Experiment
-
Returns the experiment permanent id.
- getPermId() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.id.ObjectPermIdId
-
- getPermId() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Project
-
Returns the permanent id of the project.
- getPermId() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample
-
Returns the sample permanent id.
- getPermId() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample.SampleInitializer
-
- getPreviousTermOrdinal() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.NewVocabularyTerm
-
Return the position of predecessor term in the vocabulary.
- getProjectCode() - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.Experiment
-
- getProjects() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SpaceWithProjectsAndRoleAssignments
-
Returns all projects of this space.
- getProperties() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- getProperties() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet
-
- getProperties() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Experiment.ExperimentInitializer
-
- getProperties() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Experiment
-
- getProperties() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Material
-
- getProperties() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Material.MaterialInitializer
-
- getProperties() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample
-
- getProperties() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample.SampleInitializer
-
- getProperties() - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.DataSet
-
- getProperties() - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.Experiment
-
- getPropertiesJson() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample
-
- getPropertyCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchCriteria.PropertyMatchClause
-
Return the code of the property to compare against.
- getPropertyTypeGroups() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityType
-
Return the grouped property types for this entity type.
- getPropertyTypeGroups() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityTypeInitializer
-
- getPropertyTypes() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyTypeGroup
-
- getPropertyTypes() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyTypeGroup.PropertyTypeGroupInitializer
-
- getRegistrationDate() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet
-
- getRegistrationDate() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityRegistrationDetails.EntityRegistrationDetailsInitializer
-
- getRegistrationDate() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityRegistrationDetails
-
- getRegistrationDate() - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.DataSet
-
- getRegistrationDate() - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.Experiment
-
- getRegistrationDetails() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Attachment.AttachmentInitializer
-
- getRegistrationDetails() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Attachment
-
Return the registration details.
- getRegistrationDetails() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- getRegistrationDetails() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet
-
Return the data set registration details.
- getRegistrationDetails() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Experiment.ExperimentInitializer
-
- getRegistrationDetails() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Experiment
-
- getRegistrationDetails() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Material
-
- getRegistrationDetails() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Material.MaterialInitializer
-
- getRegistrationDetails() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Project
-
Return the vocabulary term registration details.
- getRegistrationDetails() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample
-
Return the sample registration details.
- getRegistrationDetails() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample.SampleInitializer
-
- getRegistrationDetails() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.VocabularyTerm
-
Return the vocabulary term registration details.
- getRetrievedConnections() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- getRetrievedConnections() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet
-
- getRetrievedFetchOptions() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample
-
Returns fetch options used to retrieved this sample object.
- getRetrievedFetchOptions() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample.SampleInitializer
-
- getRoles(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SpaceWithProjectsAndRoleAssignments
-
Returns all access roles the specified user has on this space.
- getRootExceptionClassName() - Method in exception ch.systemsx.cisd.common.exceptions.MasqueradingException
-
- getSampleIdentifierOrNull() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- getSampleIdentifierOrNull() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet
-
- getSamples() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.MetaprojectAssignments
-
- getSamples() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.MetaprojectAssignmentsIds
-
- getSampleTypeCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample
-
Returns the sample type code.
- getSampleTypeCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample.SampleInitializer
-
- getSampleTypeId() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample
-
Returns the sample type id.
- getSampleTypeId() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample.SampleInitializer
-
- getService(RpcServiceInterfaceVersionDTO, Class<T>, String, boolean) - Method in interface ch.systemsx.cisd.common.api.IRpcServiceFactory
-
Get a proxy to the RPC service interface specified by ifaceVersion
.
- getSessionToken() - Method in interface ch.systemsx.cisd.openbis.plugin.proteomics.client.api.v1.IProteomicsDataApiFacade
-
Return the session token for the logged-in user.
- getSettings() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.WebAppSettings
-
- getSimpleClassName() - Method in class ch.systemsx.cisd.common.exceptions.NotImplementedException.StackTraceExtractor
-
- getSpaceCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Project
-
Returns the space code.
- getSpaceCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample
-
Returns the space code.
- getSpaceCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample.SampleInitializer
-
- getSpaceCode() - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.Experiment
-
- getStatus() - Method in exception ch.systemsx.cisd.common.exceptions.ExceptionWithStatus
-
- getSubCriterias() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchCriteria
-
- getSupportedInterfaces(String, boolean) - Method in interface ch.systemsx.cisd.common.api.IRpcServiceFactory
-
Get the RPC service interfaces supported by the server.
- getSupportedInterfaces() - Method in interface ch.systemsx.cisd.common.api.IRpcServiceNameServer
-
Return a collection of interfaces supported by this server
- getTargetEntityKind() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchSubCriteria
-
- getTechId() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.id.ObjectTechIdId
-
- getTerms() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.ControlledVocabularyPropertyType
-
- getTerms() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Vocabulary
-
Returns the vocabulary terms.
- getTimeZone() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchCriteria.TimeAttributeMatchClause
-
Return the time zone to compare against.
- getTitle() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Attachment.AttachmentInitializer
-
- getTitle() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Attachment
-
Returns the title given by the user when uploading this attachment.
- getType() - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.DataSet
-
- getTypeCode() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.id.material.MaterialCodeAndTypeCodeId
-
- getUrlSuffix() - Method in class ch.systemsx.cisd.common.api.RpcServiceInterfaceVersionDTO
-
The suffix added to the server's URL to produce the URL for this interface.
- getUrlTemplate() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Vocabulary
-
Returns a URL template (e.g a search query) that can display additional information for
concrete vocabulary terms.
- getUserDisplaySettings(String) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
- getUserEmail() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityRegistrationDetails
-
- getUserFirstName() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityRegistrationDetails
-
- getUserId() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityRegistrationDetails.EntityRegistrationDetailsInitializer
-
- getUserId() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityRegistrationDetails
-
- getUserLastName() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityRegistrationDetails
-
- getUsers() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SpaceWithProjectsAndRoleAssignments
-
Returns the set of all users that have a role in this space.
- getValidationPluginInfo() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityType
-
- getValidationPluginInfo() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityTypeInitializer
-
- getVersion() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Attachment.AttachmentInitializer
-
- getVersion() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Attachment
-
Returns the version of this attachment.
- getVersions() - Method in class ch.systemsx.cisd.common.api.RpcServiceInterfaceDTO
-
- getVocabulary() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.ControlledVocabularyPropertyType
-
- getVocabularyTermsMap(String) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
- getWaitingTimeBetweenRetries() - Method in interface ch.systemsx.cisd.common.api.retry.config.RetryConfiguration
-
- getWaitingTimeBetweenRetries() - Method in class ch.systemsx.cisd.common.api.retry.config.StaticRetryConfiguration
-
- getWaitingTimeBetweenRetriesIncreasingFactor() - Method in interface ch.systemsx.cisd.common.api.retry.config.RetryConfiguration
-
- getWaitingTimeBetweenRetriesIncreasingFactor() - Method in class ch.systemsx.cisd.common.api.retry.config.StaticRetryConfiguration
-
- getWebAppId() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.WebAppSettings
-
- getWebAppSettings(String, String) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationChangingService
-
Returns the persistent settings for a given custom web app.
- IDataSetFilter - Interface in ch.systemsx.cisd.openbis.generic.shared.api.v1.filter
-
Interface filters of
DataSet
instances.
- IDataSetId - Interface in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.id.dataset
-
Holds information that uniquely identifies a data set in openBIS.
- IExperimentId - Interface in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.id.experiment
-
Holds information that uniquely identifies an experiment in openBIS.
- IGeneralInformationChangingService - Interface in ch.systemsx.cisd.openbis.generic.shared.api.v1
-
Service for changing general informations.
- IGeneralInformationService - Interface in ch.systemsx.cisd.openbis.generic.shared.api.v1
-
Service for retrieving general informations.
- IMaterialId - Interface in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.id.material
-
Holds information that uniquely identifies a material in openBIS.
- IMetaprojectId - Interface in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.id.metaproject
-
Holds information that uniquely identifies a metaproject in openBIS.
- IncompatibleAPIVersionsException - Exception in ch.systemsx.cisd.common.api
-
Exception that is thrown if the client can not talk to the server because of API version
incompatibility.
- IncompatibleAPIVersionsException(int, int) - Constructor for exception ch.systemsx.cisd.common.api.IncompatibleAPIVersionsException
-
- InternalErr - Exception in ch.systemsx.cisd.common.exceptions
-
Exception representing internal error in the program caused by programmer error.
- InvalidAuthenticationException - Exception in ch.systemsx.cisd.common.exceptions
-
Exception to be thrown when authentication of a service at another service fails.
- InvalidAuthenticationException(String) - Constructor for exception ch.systemsx.cisd.common.exceptions.InvalidAuthenticationException
-
- InvalidAuthenticationException(String, Throwable) - Constructor for exception ch.systemsx.cisd.common.exceptions.InvalidAuthenticationException
-
- InvalidExternalDataException - Exception in ch.systemsx.cisd.common.exceptions
-
Data provided to the system from another system is invalid.
- InvalidExternalDataException(String) - Constructor for exception ch.systemsx.cisd.common.exceptions.InvalidExternalDataException
-
- InvalidExternalDataException(String, Throwable) - Constructor for exception ch.systemsx.cisd.common.exceptions.InvalidExternalDataException
-
- InvalidSessionException - Exception in ch.systemsx.cisd.common.exceptions
-
This UserFailureException
extension signals that a session has expired.
- InvalidSessionException(String) - Constructor for exception ch.systemsx.cisd.common.exceptions.InvalidSessionException
-
- invoke(MethodInvocation) - Method in class ch.systemsx.cisd.common.api.retry.RetryInterceptor
-
- IObjectId - Interface in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.id
-
Holds information that uniquely identifies an object in openBIS.
- IProjectId - Interface in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.id.project
-
Holds information that uniquely identifies a project in openBIS.
- IProteomicsDataApiFacade - Interface in ch.systemsx.cisd.openbis.plugin.proteomics.client.api.v1
-
Facade for openBIS proteomics data service to be used by a proteomics pipeline server like p-grade.
- IProteomicsDataService - Interface in ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1
-
- IRpcService - Interface in ch.systemsx.cisd.common.api
-
The most generic interface for RPC invocations into openBIS.
- IRpcServiceFactory - Interface in ch.systemsx.cisd.common.api
-
A factory for creating proxies to RPC services on a data store server.
- IRpcServiceNameServer - Interface in ch.systemsx.cisd.common.api
-
An Interface for finding out about the IRpcService interfaces supported by a server.
- ISampleId - Interface in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.id.sample
-
Holds information that uniquely identifies a sample in openBIS.
- isAutomaticCodeGeneration() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SampleType
-
Returns true
if the sample code is created automatically.
- isAutomaticCodeGeneration() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SampleType.SampleTypeInitializer
-
- isChosenFromList() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Vocabulary
-
Return true
if the vocabulary was chosen from a list.
- isContainerDataSet() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- isContainerDataSet() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet
-
- isDeletionDisallowed() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSetType.DataSetTypeInitializer
-
- isDeletionDisallowed() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSetType
-
Returns true
if deletion for data sets of this type are disallowed.
- isDinamic() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyType
-
- isDinamic() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyType.PropertyTypeInitializer
-
- isError() - Method in class ch.systemsx.cisd.common.exceptions.Status
-
- isInternalNamespace() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Vocabulary
-
Returns true
if the vocabulary is in the internal openBIS namespace.
- isLinkDataSet() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- isLinkDataSet() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet
-
- isListable() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SampleType
-
Returns true
if this is a sample type of listable samples.
- isListable() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SampleType.SampleTypeInitializer
-
- isManaged() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyType
-
- isManaged() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyType.PropertyTypeInitializer
-
- isManagedInternally() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Vocabulary
-
Returns true
if the vocabulary is managed internally.
- isMandatory() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyType
-
- isMandatory() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyType.PropertyTypeInitializer
-
- isNonRetriableError() - Method in class ch.systemsx.cisd.common.exceptions.Status
-
- isOfficial() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.VocabularyTerm
-
- isOK() - Method in class ch.systemsx.cisd.common.exceptions.Status
-
- isRetriable() - Method in exception ch.systemsx.cisd.common.exceptions.EnvironmentFailureException
-
Returns the assessment of the subsystem throwing the exception whether the failure could be
temporarily and thus retrying the operation (on a higher level) could possibly help to cure
the problem.
- isRetriable() - Method in exception ch.systemsx.cisd.common.exceptions.HighLevelException
-
Returns the assessment of the subsystem throwing the exception whether the failure could be
temporarily and thus retrying the operation (on a higher level) could possibly help to cure
the problem.
- isRetriable(Throwable) - Static method in exception ch.systemsx.cisd.common.exceptions.HighLevelException
-
Returns the assessment of the subsystem throwing the exception whether the failure could be
temporarily and thus retrying the operation (on a higher level) could possibly help to cure
the problem.
- isRetriableError() - Method in class ch.systemsx.cisd.common.exceptions.Status
-
- isSessionActive(String) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Returns true if session with the specified token is still active, false otherwise.
- isShowContainer() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SampleType
-
Returns true
if for samples of this type the container field is shown in
edit/registration form.
- isShowContainer() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SampleType.SampleTypeInitializer
-
- isShowInEditViews() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyType
-
- isShowInEditViews() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyType.PropertyTypeInitializer
-
- isShowParentMetaData() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SampleType
-
Returns true
if meta data of parents of samples of this type should be shown.
- isShowParentMetaData() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SampleType.SampleTypeInitializer
-
- isShowParents() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SampleType
-
Returns true
if for sample of this type the parents field is shown in
edit/registration form.
- isShowParents() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SampleType.SampleTypeInitializer
-
- isSpaceLevel() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Role
-
Returns true
if this role is for a particular space.
- isStorageConfirmed() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- isStorageConfirmed() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet
-
- isStub() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet
-
- isStub() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Experiment
-
- isStub() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample
-
- isUniqueSubcodes() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SampleType
-
Returns true
if the sub code of samples of this type has to be unique.
- isUniqueSubcodes() - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SampleType.SampleTypeInitializer
-
- listAttachmentsForExperiment(String, IExperimentId, boolean) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Lists attachments of specified experiment.
- listAttachmentsForProject(String, IProjectId, boolean) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Lists attachments of specified project.
- listAttachmentsForSample(String, ISampleId, boolean) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Lists attachments of specified sample.
- listDataSets(String, List<Sample>) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Return all data sets attached to the given samples.
- listDataSets(String, List<Sample>, EnumSet<DataSet.Connections>) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Return all data sets attached to the given samples with connections.
- listDataSetsByExperiment(String, long) - Method in interface ch.systemsx.cisd.openbis.plugin.proteomics.client.api.v1.IProteomicsDataApiFacade
-
Returns all data sets of specified experiment which the specified user is allowed to read.
- listDataSetsByExperiment(String, String, long) - Method in interface ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.IProteomicsDataService
-
Returns all data sets of specified experiment which the specified user is allowed to read.
- listDataSetsForExperiments(String, List<Experiment>, EnumSet<DataSet.Connections>) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Return all data sets attached to the given experiments with connections.
- listDataSetsForExperimentsOnBehalfOfUser(String, List<Experiment>, EnumSet<DataSet.Connections>, String) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Return all data sets attached to the given experiments with connections that the user userId is allowed to see.
- listDataSetsForSample(String, Sample, boolean) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Return the data sets attached to the specified sample, optionally including child samples.
- listDataSetsOnBehalfOfUser(String, List<Sample>, EnumSet<DataSet.Connections>, String) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Return all data sets attached to the given samples with connections that the user userId is allowed to see.
- listDataSetTypes(String) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Returns all data set types.
- listDataStores(String) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Lists all DSS server registered this openBIS server instance.
- listDataStoreServerProcessingPluginInfos() - Method in interface ch.systemsx.cisd.openbis.plugin.proteomics.client.api.v1.IProteomicsDataApiFacade
-
Lists all processing plugins on DSS.
- listDataStoreServerProcessingPluginInfos(String) - Method in interface ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.IProteomicsDataService
-
Lists all processing plugins on DSS.
- listExperiments(String, List<Project>, String) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Return all experiments of the given type that belong to the supplied projects.
- listExperiments(String, List<String>) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Return all experiments matching a specified set of identifiers.
- listExperiments(String, String, String) - Method in interface ch.systemsx.cisd.openbis.plugin.proteomics.client.api.v1.IProteomicsDataApiFacade
-
Returns all experiments of specified type which the specified user is allowed to read.
- listExperiments(String, String, String) - Method in interface ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.IProteomicsDataService
-
Returns all experiments of specified type which the specified user is allowed to read.
- listExperimentsHavingDataSets(String, List<Project>, String) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Return all experiments of the given type that belong to the supplied projects and have registered data sets.
- listExperimentsHavingSamples(String, List<Project>, String) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Return all experiments of the given type that belong to the supplied projects and have registered samles.
- listExperimentTypes(String) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Returns all experiment types.
- listMetaprojects(String) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Lists all metaprojects belonging to current user.
- listMetaprojectsOnBehalfOfUser(String, String) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Lists all metaprojects belonging to specified user.
- listNamedRoleSets(String) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Returns all named role sets.
- listProjects(String) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Returns all available projects.
- listProjects(String) - Method in interface ch.systemsx.cisd.openbis.plugin.proteomics.client.api.v1.IProteomicsDataApiFacade
-
Returns all projects where the specified user has USER access rights.
- listProjectsOnBehalfOfUser(String, String) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Returns all available projects that a particular user is allowed to see.
- listPropertyTypes(String, boolean) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Lists property types.
- listRawDataSamples(String) - Method in interface ch.systemsx.cisd.openbis.plugin.proteomics.client.api.v1.IProteomicsDataApiFacade
-
Returns all samples of type MS_INJECTION in space MS_DATA which have a parent sample which
the specified user is allow to read.
- listRawDataSamples(String, String) - Method in interface ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.IProteomicsDataService
-
Returns all samples of type MS_INJECTION in space MS_DATA which have a parent sample which
the specified user is allowed to read.
- listSamplesForExperiment(String, String) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Return all samples that belong to the supplied experiment.
- listSamplesForExperimentOnBehalfOfUser(String, String, String) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Return all samples that belong to the supplied experiment that are visible to user userId.
- listSampleTypes(String) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Returns all sample types.
- listSearchExperiments(String) - Method in interface ch.systemsx.cisd.openbis.plugin.proteomics.client.api.v1.IProteomicsDataApiFacade
-
Returns all experiments of type MS_SEARCH which the specified user is allowed to
read.
- listSearchExperiments(String, String) - Method in interface ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.IProteomicsDataService
-
Deprecated.
- listSpacesWithProjectsAndRoleAssignments(String, String) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Returns all spaces of specified database instance enriched with their projects and role assignments.
- listVocabularies(String) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Returns all available vocabularies together with the contained terms.
- logout(String) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Logout the session with the specified session token.
- logout() - Method in interface ch.systemsx.cisd.openbis.plugin.proteomics.client.api.v1.IProteomicsDataApiFacade
-
Logs current user out.
- logout(String) - Method in interface ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.IProteomicsDataService
-
Logout the session with the specified session token.
- pass(DataSet) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.filter.AndDataSetFilter
-
- pass(DataSet) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.filter.IDataSetFilter
-
Returns true
if the specified data set passes the filter.
- pass(DataSet) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.filter.PropertiesBasedDataSetFilter
-
- pass(DataSet) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.filter.TypeBasedDataSetFilter
-
Return true
if the data set type code of the specified data set matches the
regular expression provided as constructor argument.
- PREFFERED_BEAN_NAME - Static variable in interface ch.systemsx.cisd.common.api.IRpcServiceNameServer
-
The preferred name of the bean in Spring
- PREFFERED_SERVICE_NAME - Static variable in interface ch.systemsx.cisd.common.api.IRpcServiceNameServer
-
The preferred name of the bean in Spring
- PREFFERED_URL_SUFFIX - Static variable in interface ch.systemsx.cisd.common.api.IRpcServiceNameServer
-
The preferred suffix of the url of the name server service
- processDataSets(String, String, List<String>) - Method in interface ch.systemsx.cisd.openbis.plugin.proteomics.client.api.v1.IProteomicsDataApiFacade
-
Processes the specified data sets by the DSS processing plug-in of specified key for the
specified user.
- processDataSets(String, String, String, List<String>) - Method in interface ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.IProteomicsDataService
-
Processes the specified data sets by the DSS processing plug-in of specified key for the
specified user.
- processingRawData(String, String, long[], String) - Method in interface ch.systemsx.cisd.openbis.plugin.proteomics.client.api.v1.IProteomicsDataApiFacade
-
Deprecated.
- processingRawData(String, String, String, long[], String) - Method in interface ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.IProteomicsDataService
-
Deprecated.
- processProteinResultDataSets(String, String, String, String, long[]) - Method in interface ch.systemsx.cisd.openbis.plugin.proteomics.client.api.v1.IProteomicsDataApiFacade
-
Processes the data sets of specified experiments by the DSS
processing plug-in of specified key for the specified user.
- processProteinResultDataSets(String, String, String, String, long[]) - Method in interface ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.IProteomicsDataService
-
Processes the data sets of specified experiments by the DSS processing plug-in of specified
key for the specified user.
- processSearchData(String, String, long[]) - Method in interface ch.systemsx.cisd.openbis.plugin.proteomics.client.api.v1.IProteomicsDataApiFacade
-
Deprecated.
- processSearchData(String, String, String, long[]) - Method in interface ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.IProteomicsDataService
-
Deprecated.
- Project - Class in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto
-
Immutable value object representing a project.
- Project(Long, String, String, String, String) - Constructor for class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Project
-
Creates a new instance for the specified tech id, perm id, space code and project code.
- Project(String, String) - Constructor for class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Project
-
Creates a new instance for the specified space code and project code.
- Project(String, String, EntityRegistrationDetails) - Constructor for class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Project
-
Creates a new instance for the specified tech id, perm id, space code and project code.
- Project(Long, String, String, String, String, EntityRegistrationDetails) - Constructor for class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Project
-
Creates a new instance for the specified space code and project code.
- ProjectIdentifierId - Class in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.id.project
-
Identifies a project by identifier.
- ProjectIdentifierId(String) - Constructor for class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.id.project.ProjectIdentifierId
-
- ProjectPermIdId - Class in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.id.project
-
Identifies a project by perm id.
- ProjectPermIdId(String) - Constructor for class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.id.project.ProjectPermIdId
-
- ProjectTechIdId - Class in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.id.project
-
Identifies a project by tech id.
- ProjectTechIdId(Long) - Constructor for class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.id.project.ProjectTechIdId
-
- PropertiesBasedDataSetFilter - Class in ch.systemsx.cisd.openbis.generic.shared.api.v1.filter
-
Filter based on data set properties.
- PropertiesBasedDataSetFilter(Map<String, String>) - Constructor for class ch.systemsx.cisd.openbis.generic.shared.api.v1.filter.PropertiesBasedDataSetFilter
-
- PropertyKey - Class in ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto
-
Immutable class of a property key.
- PropertyKey(String, String) - Constructor for class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.PropertyKey
-
Creates a new instance for specified ID and label.
- PropertyType - Class in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto
-
Immutable value object representing a property type.
- PropertyType(PropertyType.PropertyTypeInitializer) - Constructor for class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyType
-
Creates a new instance with the provided initializer
- PropertyType.PropertyTypeInitializer - Class in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto
-
Class used to initialize a new data set instance.
- PropertyType.PropertyTypeInitializer() - Constructor for class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyType.PropertyTypeInitializer
-
- PropertyTypeGroup - Class in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto
-
Immutable value object representing a data set type.
- PropertyTypeGroup(PropertyTypeGroup.PropertyTypeGroupInitializer) - Constructor for class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyTypeGroup
-
Creates a new instance with the provided initializer
- PropertyTypeGroup.PropertyTypeGroupInitializer - Class in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto
-
Class used to initialize a new data set instance.
- PropertyTypeGroup.PropertyTypeGroupInitializer() - Constructor for class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyTypeGroup.PropertyTypeGroupInitializer
-
- ProteomicsDataApiTest - Class in ch.systemsx.cisd.openbis.plugin.proteomics.client.api.v1
-
Example of usage of Proteomics Data API.
- ProteomicsDataApiTest() - Constructor for class ch.systemsx.cisd.openbis.plugin.proteomics.client.api.v1.ProteomicsDataApiTest
-
- putProperty(String, String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- putProperty(String, String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Experiment.ExperimentInitializer
-
- putProperty(String, String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample.SampleInitializer
-
- Sample - Class in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto
-
Immutable value object representing a sample.
- Sample(Sample.SampleInitializer) - Constructor for class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample
-
Creates a new instance with the provided initializer
- Sample.SampleInitializer - Class in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto
-
Class used to initialize a new sample instance.
- Sample.SampleInitializer() - Constructor for class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample.SampleInitializer
-
- SampleFetchOption - Enum in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto
-
- SampleIdentifierId - Class in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.id.sample
-
Identifies a sample by identifier.
- SampleIdentifierId(String) - Constructor for class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.id.sample.SampleIdentifierId
-
- SamplePermIdId - Class in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.id.sample
-
Identifies a sample by perm id.
- SamplePermIdId(String) - Constructor for class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.id.sample.SamplePermIdId
-
- SampleTechIdId - Class in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.id.sample
-
Identifies a sample by tech id.
- SampleTechIdId(Long) - Constructor for class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.id.sample.SampleTechIdId
-
- SampleType - Class in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto
-
Immutable value object representing a sample type.
- SampleType(SampleType.SampleTypeInitializer) - Constructor for class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SampleType
-
Creates a new instance with the provided initializer
- SampleType.SampleTypeInitializer - Class in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto
-
Class used to initialize a new
SampleType
instance.
- SampleType.SampleTypeInitializer() - Constructor for class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SampleType.SampleTypeInitializer
-
- SearchableEntityKind - Enum in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto
-
An enum listing the different kinds of entities that are searchable.
- SearchCriteria - Class in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto
-
A (mutable) object representing the specification of a search.
- SearchCriteria() - Constructor for class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchCriteria
-
- SearchCriteria.AnyFieldMatchClause - Class in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto
-
A MatchClause for checking that any of the properties or attributes equals a desired value.
- SearchCriteria.AnyPropertyMatchClause - Class in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto
-
A MatchClause for checking that any of the properties equals a desired value.
- SearchCriteria.AttributeMatchClause - Class in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto
-
A MatchClause for checking that an attribute equals a desired value.
- SearchCriteria.CompareMode - Enum in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto
-
- SearchCriteria.MatchClause - Class in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto
-
A specification of one field (either property or attribute) and desired value for that field.
- SearchCriteria.MatchClauseAttribute - Enum in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto
-
An enum listing the different attributes that can be compared against.
- SearchCriteria.MatchClauseFieldType - Enum in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto
-
An enum listing the different field types that can be compared against.
- SearchCriteria.MatchClauseTimeAttribute - Enum in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto
-
An enum listing the different attributes containing time values that can be compared against.
- SearchCriteria.PropertyMatchClause - Class in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto
-
A MatchClause for checking that a property equals a desired value.
- SearchCriteria.SearchOperator - Enum in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto
-
Operators for combining MatchClause objects.
- SearchCriteria.TimeAttributeMatchClause - Class in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto
-
A MatchClause for comparing a time attribute to a specified value.
- searchForDataSets(String, SearchCriteria) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Return all data sets matching specified search criteria.
- searchForDataSetsOnBehalfOfUser(String, SearchCriteria, String) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Return all data sets matching specified search criteria and visible to user userId.
- searchForExperiments(String, SearchCriteria) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Returns all experiments matching specified search criteria.
- searchForMaterials(String, SearchCriteria) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Returns all material fulfilling specified search criteria.
- searchForSamples(String, SearchCriteria) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Return all samples that match the search criteria.
- searchForSamples(String, SearchCriteria, EnumSet<SampleFetchOption>) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Return all samples that match the search criteria.
- searchForSamplesOnBehalfOfUser(String, SearchCriteria, EnumSet<SampleFetchOption>, String) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Return all samples that match the search criteria and that a particular user is allowed to see.
- SearchSubCriteria - Class in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto
-
A specification of criteria for a subquery about a connected entity.
- SERVER_URL - Static variable in interface ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.IProteomicsDataService
-
Service part of the URL to access this service remotely.
- SERVICE_NAME - Static variable in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationChangingService
-
Name of this service for which it is registered at the RPC name server.
- SERVICE_NAME - Static variable in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Name of this service for which it is registered at the RPC name server.
- SERVICE_NAME - Static variable in interface ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.IProteomicsDataService
-
Name of this service for which it is registered at the RPC name server.
- SERVICE_URL - Static variable in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationChangingService
-
Application part of the URL to access this service remotely.
- SERVICE_URL - Static variable in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
-
Application part of the URL to access this service remotely.
- setAttachmentHolderId(IObjectId) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Attachment.AttachmentInitializer
-
- setAutomaticCodeGeneration(boolean) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SampleType.SampleTypeInitializer
-
- setBiologicalExperiment(Experiment) - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.MsInjectionDataInfo
-
- setBiologicalExperimentIdentifier(String) - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.MsInjectionDataInfo
-
- setBiologicalSampleID(long) - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.MsInjectionDataInfo
-
- setBiologicalSampleIdentifier(String) - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.MsInjectionDataInfo
-
- setBiologicalSampleProperties(Map<PropertyKey, Serializable>) - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.MsInjectionDataInfo
-
- setChildReferences(List<Long>, Map<Long, Sample>) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample.SampleInitializer
-
- setChildren(List<Sample>) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample.SampleInitializer
-
- setChildrenCodes(List<String>) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- setChosenFromList(boolean) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Vocabulary.VocabularyInitializer
-
- setCode(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- setCode(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityTypeInitializer
-
- setCode(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Experiment.ExperimentInitializer
-
- setCode(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.NewVocabularyTerm
-
Set the term's code.
- setCode(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyType.PropertyTypeInitializer
-
- setCode(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample.SampleInitializer
-
- setCode(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Vocabulary.VocabularyInitializer
-
- setCode(String) - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.DataSet
-
- setCode(String) - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.Experiment
-
- setCodePrefix(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SampleType.SampleTypeInitializer
-
- setContainedDataSets(List<DataSet>) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- setContainerDataSet(boolean) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- setContainerOrNull(DataSet) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- setDataSetKind(DataSetKind) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSetType.DataSetTypeInitializer
-
- setDataSets(List<DataSet>) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.MetaprojectAssignments
-
- setDataSets(Set<DataSet>) - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.MsInjectionDataInfo
-
- setDataSetTypeCode(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- setDataType(DataTypeCode) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyType.PropertyTypeInitializer
-
- setDeletionDisallowed(boolean) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSetType.DataSetTypeInitializer
-
- setDescription(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Attachment.AttachmentInitializer
-
- setDescription(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityTypeInitializer
-
- setDescription(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.NewVocabularyTerm
-
Set the term's description.
- setDescription(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyType.PropertyTypeInitializer
-
- setDescription(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Vocabulary.VocabularyInitializer
-
- setDinamic(boolean) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyType.PropertyTypeInitializer
-
- setDinamic(boolean) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyType
-
- setDownloadLink(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Attachment.AttachmentInitializer
-
- setEmail(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityRegistrationDetails.EntityRegistrationDetailsInitializer
-
- setExperimentIdentifier(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- setExperimentIdentifierOrNull(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample.SampleInitializer
-
- setExperiments(List<Experiment>) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.MetaprojectAssignments
-
- setExperimentTypeCode(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Experiment.ExperimentInitializer
-
- setExternalDataManagementSystem(ExternalDataManagementSystem) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- setExternalDataSetCode(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- setExternalDataSetLink(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- setFetchOptions(DataSetFetchOptions) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet
-
- setFileName(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Attachment.AttachmentInitializer
-
- setFirstName(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityRegistrationDetails.EntityRegistrationDetailsInitializer
-
- setId(Long) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- setId(Long) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Experiment.ExperimentInitializer
-
- setId(Long) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Material.MaterialInitializer
-
- setId(Long) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample.SampleInitializer
-
- setId(Long) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Vocabulary.VocabularyInitializer
-
- setId(long) - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.DataSet
-
- setId(long) - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.Experiment
-
- setIdentifier(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Experiment.ExperimentInitializer
-
- setIdentifier(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample.SampleInitializer
-
- setInternalNamespace(boolean) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Vocabulary.VocabularyInitializer
-
- setIsStub(boolean) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Experiment.ExperimentInitializer
-
- setLabel(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.NewVocabularyTerm
-
Set the term's label.
- setLabel(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyType.PropertyTypeInitializer
-
- setLastName(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityRegistrationDetails.EntityRegistrationDetailsInitializer
-
- setLatestDataSetRegistrationDates(Map<String, Date>) - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.MsInjectionDataInfo
-
- setLinkDataSet(boolean) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- setListable(boolean) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SampleType.SampleTypeInitializer
-
- setMainDataSetPath(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSetType.DataSetTypeInitializer
-
- setMainDataSetPattern(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSetType.DataSetTypeInitializer
-
- setManaged(boolean) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyType.PropertyTypeInitializer
-
- setManaged(boolean) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyType
-
- setManagedInternally(boolean) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Vocabulary.VocabularyInitializer
-
- setMandatory(boolean) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyType.PropertyTypeInitializer
-
- setMaterialCode(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Material.MaterialInitializer
-
- setMaterialProperties(Map<String, Material>) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Material.MaterialInitializer
-
- setMaterials(List<Material>) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.MetaprojectAssignments
-
- setMaterialTypeIdentifier(MaterialTypeIdentifier) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Material.MaterialInitializer
-
- setMaximumNumberOfRetries(int) - Method in class ch.systemsx.cisd.common.api.retry.config.StaticRetryConfiguration
-
- setMetaproject(Metaproject) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.MetaprojectAssignments
-
- setModificationDate(Date) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityRegistrationDetails.EntityRegistrationDetailsInitializer
-
- setModifierEmail(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityRegistrationDetails.EntityRegistrationDetailsInitializer
-
- setModifierFirstName(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityRegistrationDetails.EntityRegistrationDetailsInitializer
-
- setModifierLastName(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityRegistrationDetails.EntityRegistrationDetailsInitializer
-
- setModifierUserId(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityRegistrationDetails.EntityRegistrationDetailsInitializer
-
- setMsInjectionSampleCode(String) - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.MsInjectionDataInfo
-
- setMsInjectionSampleID(long) - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.MsInjectionDataInfo
-
- setMsInjectionSampleProperties(Map<PropertyKey, Serializable>) - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.MsInjectionDataInfo
-
- setMsInjectionSampleRegistrationDate(Date) - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.MsInjectionDataInfo
-
- setName(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyTypeGroup.PropertyTypeGroupInitializer
-
- setOperator(SearchCriteria.SearchOperator) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchCriteria
-
Set the operator for combining MatchClause objects.
- setParentCodes(List<String>) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- setParentReferences(List<Long>, Map<Long, Sample>) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample.SampleInitializer
-
- setParents(List<Sample>) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample.SampleInitializer
-
- setPermId(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Experiment.ExperimentInitializer
-
- setPermId(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample.SampleInitializer
-
- setPreviousTermOrdinal(Long) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.NewVocabularyTerm
-
Set the position of predecessor term in the vocabulary.
- setProjectCode(String) - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.Experiment
-
- setProperties(Map<String, String>) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Material.MaterialInitializer
-
- setProperties(Map<PropertyKey, Serializable>) - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.DataSet
-
- setProperties(Map<PropertyKey, Serializable>) - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.Experiment
-
- setRegistrationDate(Date) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityRegistrationDetails.EntityRegistrationDetailsInitializer
-
- setRegistrationDate(Date) - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.DataSet
-
- setRegistrationDate(Date) - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.Experiment
-
- setRegistrationDetails(EntityRegistrationDetails) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Attachment.AttachmentInitializer
-
- setRegistrationDetails(EntityRegistrationDetails) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- setRegistrationDetails(EntityRegistrationDetails) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Experiment.ExperimentInitializer
-
- setRegistrationDetails(EntityRegistrationDetails) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Material.MaterialInitializer
-
- setRegistrationDetails(EntityRegistrationDetails) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample.SampleInitializer
-
- setRetrievedConnections(EnumSet<DataSet.Connections>) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- setRetrievedFetchOptions(EnumSet<SampleFetchOption>) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample.SampleInitializer
-
- setSampleIdentifierOrNull(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- setSamples(List<Sample>) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.MetaprojectAssignments
-
- setSampleTypeCode(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample.SampleInitializer
-
- setSampleTypeId(Long) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample.SampleInitializer
-
- setShowContainer(boolean) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SampleType.SampleTypeInitializer
-
- setShowInEditViews(boolean) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyType.PropertyTypeInitializer
-
- setShowInEditViews(boolean) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.PropertyType
-
- setShowParentMetaData(boolean) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SampleType.SampleTypeInitializer
-
- setShowParents(boolean) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SampleType.SampleTypeInitializer
-
- setSpaceCode(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample.SampleInitializer
-
- setSpaceCode(String) - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.Experiment
-
- setStorageConfirmed(boolean) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- setStorageConfirmed(boolean) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet
-
- setStub(boolean) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.DataSetInitializer
-
- setStub(boolean) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Sample.SampleInitializer
-
- setTerms(List<ControlledVocabularyPropertyType.VocabularyTerm>) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.ControlledVocabularyPropertyType.ControlledVocabularyPropertyTypeInitializer
-
- setTerms(List<VocabularyTerm>) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Vocabulary.VocabularyInitializer
-
- setTitle(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Attachment.AttachmentInitializer
-
- setType(String) - Method in class ch.systemsx.cisd.openbis.plugin.proteomics.shared.api.v1.dto.DataSet
-
- setUniqueSubcodes(boolean) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SampleType.SampleTypeInitializer
-
- setUrlTemplate(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Vocabulary.VocabularyInitializer
-
- setUserId(String) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityRegistrationDetails.EntityRegistrationDetailsInitializer
-
- setValidationPluginInfo(ValidationPluginInfo) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.EntityTypeInitializer
-
- setVersion(int) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Attachment.AttachmentInitializer
-
- setVocabulary(Vocabulary) - Method in class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.ControlledVocabularyPropertyType.ControlledVocabularyPropertyTypeInitializer
-
- setWaitingTimeBetweenRetries(int) - Method in class ch.systemsx.cisd.common.api.retry.config.StaticRetryConfiguration
-
- setWaitingTimeBetweenRetriesIncreasingFactor(float) - Method in class ch.systemsx.cisd.common.api.retry.config.StaticRetryConfiguration
-
- setWebAppSettings(String, WebAppSettings) - Method in interface ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationChangingService
-
Sets the persistent settings for a given custom web app.
- SpaceWithProjectsAndRoleAssignments - Class in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto
-
Bean which represents a space, all its projects, and all its relevant role assignments
- SpaceWithProjectsAndRoleAssignments(String) - Constructor for class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SpaceWithProjectsAndRoleAssignments
-
Creates a new instance for the specified code.
- StaticRetryConfiguration - Class in ch.systemsx.cisd.common.api.retry.config
-
- StaticRetryConfiguration() - Constructor for class ch.systemsx.cisd.common.api.retry.config.StaticRetryConfiguration
-
- Status - Class in ch.systemsx.cisd.common.exceptions
-
A class that holds the information about the status of an operation.
- StatusFlag - Enum in ch.systemsx.cisd.common.exceptions
-
The status of an operation.
- StatusWithResult<T> - Class in ch.systemsx.cisd.common.exceptions
-
A
Status
that can also hold a result.
- SystemExitException - Exception in ch.systemsx.cisd.common.exceptions
-
Thrown by SystemExit
instead of plain RuntimeException
- SystemExitException(String) - Constructor for exception ch.systemsx.cisd.common.exceptions.SystemExitException
-
- ValidationPluginInfo - Class in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto
-
Value object with name and optional description of a validation plugin.
- ValidationPluginInfo(String, String) - Constructor for class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.ValidationPluginInfo
-
- valueOf(String) - Static method in enum ch.systemsx.cisd.common.exceptions.StatusFlag
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.Connections
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSetFetchOption
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSetKind
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SampleFetchOption
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchableEntityKind
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchCriteria.CompareMode
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchCriteria.MatchClauseAttribute
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchCriteria.MatchClauseFieldType
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchCriteria.MatchClauseTimeAttribute
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchCriteria.SearchOperator
-
Returns the enum constant of this type with the specified name.
- values() - Static method in enum ch.systemsx.cisd.common.exceptions.StatusFlag
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSet.Connections
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSetFetchOption
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.DataSetKind
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SampleFetchOption
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchableEntityKind
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchCriteria.CompareMode
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchCriteria.MatchClauseAttribute
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchCriteria.MatchClauseFieldType
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchCriteria.MatchClauseTimeAttribute
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchCriteria.SearchOperator
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- Vocabulary - Class in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto
-
Immutable value object representing an openBIS vocabulary.
- Vocabulary(Vocabulary.VocabularyInitializer) - Constructor for class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Vocabulary
-
Creates a new instance with the provided initializer
- Vocabulary.VocabularyInitializer - Class in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto
-
- Vocabulary.VocabularyInitializer() - Constructor for class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.Vocabulary.VocabularyInitializer
-
- VocabularyTerm - Class in ch.systemsx.cisd.openbis.generic.shared.api.v1.dto
-
- VocabularyTerm(String, String, Long, Boolean, EntityRegistrationDetails) - Constructor for class ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.VocabularyTerm
-